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Hierarchical Analysis of Spatial and Temporal Data

Posted on May 30, 2017February 6, 2019 By admin No Comments on Hierarchical Analysis of Spatial and Temporal Data

The HASTE project, a SSF-funded project on computational science and big data, takes a holistic approach to new, intelligent ways of processing and managing very large amounts of microscopy images to leverage the imminent explosion of image data from modern experimental setups in the biosciences. One central idea is to represent datasets as intelligently formed and maintained information hierarchies, and to prioritize data acquisition and analysis to certain regions/sections of data based on automatically obtained metrics for usefulness and interestingness.

The project is a collaboration between the Wählby lab (PI),  Hellander lab (co-PI), both at the Department of Information Technology, Uppsala University, the Spjuth lab (co-PI) at the Department of Pharmaceutical Biosciences, Uppsala University,  the Nilsson lab at the Department of Biochemistry and Biophysics at Stockholm University and SciLifeLab, Vironova AB and AstraZeneca AB.

Read more on the project webpage.

 

Data Science, Data-Intensive Computing, ReserachSlider

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Data-and simulation-driven life science. Much of our work in eScience and applied ML has applications in life science, and in Systems Biology in particular. We aim to enable data-and simulation-driven scientific discovery.

HASTE - a cloud native framework for intelligent processing of image streams: http://haste.research.it.uu.se/

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Andreas HellanderFollow

Andreas Hellander
Retweet on TwitterAndreas Hellander Retweeted
SciLifeLab_DCSciLifeLab_DataCentre@SciLifeLab_DC·
3 Nov

Join our great team at @SciLifeLab_DC!

We are now looking for IT-ansvarig SciLifeLab
👉Apply by Dec 12th.
👉More & apply here: https://www.kth.se/om/work-at-kth/lediga-jobb/what:job/jobID:546469/where:4/
👉More about @SciLifeLab_DC here: https://scilifelab.se/data

@scilifelab @KTHuniversity

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A_HellanderAndreas Hellander@A_Hellander·
25 Oct

Starting in 30mins :-)

Prashant Singh@prashant_rsingh

Join us tomorrow for an exciting seminar by @uPicchini on “guided sequential ABC schemes for intractable Bayesian models”. The seminar starts at 13.15 until 14.00 CEST in Room 101127, Ångströmlaboratoriet, Uppsala University & online: https://uu-se.zoom.us/j/65354024469. Warmly welcome!

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A_HellanderAndreas Hellander@A_Hellander·
6 Oct

eSSENCE, SERC and Chalmers e-science Centre are providing core e-science education to PhD students from the SeSE platform: https://sese.nu/

Researchers - get funding to develop and give a PhD course!
@uppsalauni @lunduniversity @umeauniversitet

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A_HellanderAndreas Hellander@A_Hellander·
6 Oct

Day two of the Swedish eScience Academy organized by eSSENCE.

Interesting to learn from Sverker Holmgren of Chalmers eCommons about the holistic approach to infrastructure and support for data centric research at Chalmers!

@UmeaUniversity @UU_University @lunduniversity

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A_HellanderAndreas Hellander@A_Hellander·
6 Oct

So great to be at the Swedish e-science Academy organized by #essenceofescience! Two days of scientific exchange between colleagues nationally, and in particular from the partner universities @UU_University @UmeaUniversity @lunduniversity.

Keynote day one by Kersti Hermansson.

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Decentralized AI, Federated Learning. One focus area of the group is development of methods and software to address decentralized and privacy-preserving AI. We are core contributors to the FEDn open source framework for scalable federated machine learning:

https://github.com/scaleoutsystems/fedn
Introduction to Federated Learning by Andreas Hellander
Join the discussion on Decentralized AI:

Scaleout Systems is a spin-out from ISCL on a mission to enable decentralized AI and federated learning to production.

https://www.scaleoutsystems.com/

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