Integrative Scalable Computing Laboratory
A research group at the Department of Information Technology, Uppsala Universtity.
On Monday Oct 18, 2021 at 15:15 Prashant will give a talk in thee SciLifeLab The Svedberg seminar series. The talk will be about: “Scalable Likelihood-Free Parameter Inference of Stochastic Biochemical Reaction Networks”
Adrien has successfully defended his PhD thesis Multiscale Modeling in Systems Biology: Methods and Perspectives! The Faculty opponent was Prof. Mark Chaplain, and the grading committee consisted of Prof Marija Cvijovic, Assoc. Prof. Kevin Sanft, and Assoc. Prof. Martin Kroenbichler, Big congratulations Adrien!
We are delighted to welcome Li Ju as a new PhD student in the group. Li has recently completed a Master degree in computer science and will work on algorithms and software for federated learning. Li is part of the Center for Interdiciplinary Mathematics graduate school, and in the project we will collaborate with industry…
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Prashant Singh has been awarded a SciLifeLab Fellow position and this returns as a PI to Uppsala and ISCL after a period as Assistant Professor in Computer Science at Umeå University! The fellowship is a tenure-track position and comes with a substantial startup package, and is a part of SciLifeLabs strategy to transform and expand…
Read More “Prashant Singh appointed SciLifeLab Fellow in data-driven life science” »
The practical problems that arise when going from simple models to big models include: Most simulation algorithms do not scale well to high dimensions. Simulation can becomes prohibitively expensive due to the multiscale nature of systems. Failure of traditional engineering methodology such as sensitivity analysis and optimization due to high dimensionality, non-linearities and stochasticity…. ……
It is with mixed feelings that we say goodbye to Stefan and Annas. Both have contributed with lots of energy and science to the group, but will now move on. Stefan to a role in industry, and Anass to an assistant professorship at Ecole Centrale Casablanca. You will both be missed, and thank you so…
The exploration of a system described by a non-linear, high-dimensional and stochastic computational model is a fundamental problem in all scientific disciplines relying on modeling and simulation. In this project we are interested in the scenario where a modeler has no or very limited prior knowledge about what type of qualitative interesting behavior the model…
After two great years as a postdoc with Linda Petzold at UCSB, I am now back in Uppsala as a senior lecturer at the division of scientific computing, department of information technology. Candidates for PhD projects, master’s thesis projects and postdoc positions are more than welcome to contact me to discuss opportunities to join the…
